Changes
On January 19, 2023 at 10:40:56 AM UTC, Joan Casanelles:
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Renamed resource Environmental predictors to Spatial environmental predictors and responses in Data on wild bee taxonomic and functional diversity in Switzerland
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Updated description of resource Spatial environmental predictors and responses in Data on wild bee taxonomic and functional diversity in Switzerland from
The .zip file contains: - **Environmental predictors.** The environmental predictors used for the modelling: - The raster on the climate contains the PCA axes on the CHELSA variables. - The raster on resource availability contains the PCA axes on plant communities - The raster on land-use contains the land-use composition at 2500 m. - The raster on beekeeping intensity contains thedensity of hives within 2500 m - two raster stacks of the environmental predictors used: masking the water bodies and without masking them.
toThe .zip file contains the rasters of the environmental predictors and the predicted responses: - **Environmental predictors.**: - The raster on the climate contains the PCA axes on the CHELSA variables. - The raster on resource availability contains the PCA axes on plant communities - The raster on land-use contains the land-use composition at 2500 m. - The raster on beekeeping intensity contains thedensity of hives within 2500 m - **Responses**: - The predicted responses without masking the waterbodies (Diversity_stack_revised_Selected_descriptors.tif). - The predicted responses masking the waterbodies (masked.stack.all.diversity.tiff).
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Uploaded a new file to resource Spatial environmental predictors and responses in Data on wild bee taxonomic and functional diversity in Switzerland
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Changed value of field
restricted
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(previously{"allowed_users": "", "level": "public", "shared_secret": ""}
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Changed value of field
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2 | "author": "[{\"affiliation\": \"WSL\", \"affiliation_02\": \"ETHZ\", | 2 | "author": "[{\"affiliation\": \"WSL\", \"affiliation_02\": \"ETHZ\", | ||
3 | \"affiliation_03\": \"\", \"data_credit\": [\"collection\", | 3 | \"affiliation_03\": \"\", \"data_credit\": [\"collection\", | ||
4 | \"validation\", \"curation\", \"software\", \"publication\", | 4 | \"validation\", \"curation\", \"software\", \"publication\", | ||
5 | \"supervision\"], \"email\": \"joan.casanelles@wsl.ch\", | 5 | \"supervision\"], \"email\": \"joan.casanelles@wsl.ch\", | ||
6 | \"given_name\": \"Joan\", \"identifier\": \"0000-0003-1924-9298\", | 6 | \"given_name\": \"Joan\", \"identifier\": \"0000-0003-1924-9298\", | ||
7 | \"name\": \"Casanelles Abella\"}, {\"affiliation\": \"Institute of | 7 | \"name\": \"Casanelles Abella\"}, {\"affiliation\": \"Institute of | ||
8 | Environmental Sciences and Geography, University of Potsdam, Potsdam, | 8 | Environmental Sciences and Geography, University of Potsdam, Potsdam, | ||
9 | Germany\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | 9 | Germany\", \"affiliation_02\": \"\", \"affiliation_03\": \"\", | ||
10 | \"data_credit\": [\"collection\", \"validation\", \"curation\", | 10 | \"data_credit\": [\"collection\", \"validation\", \"curation\", | ||
11 | \"software\", \"publication\", \"supervision\"], \"email\": | 11 | \"software\", \"publication\", \"supervision\"], \"email\": | ||
12 | \"bertrand.fournier@uni-potsdam.de\", \"given_name\": \"Bertrand\", | 12 | \"bertrand.fournier@uni-potsdam.de\", \"given_name\": \"Bertrand\", | ||
13 | \"identifier\": \"\", \"name\": \"Fournier\"}, {\"affiliation\": | 13 | \"identifier\": \"\", \"name\": \"Fournier\"}, {\"affiliation\": | ||
14 | \"Nature Conservation and Landscape Ecology, University of Freiburg, | 14 | \"Nature Conservation and Landscape Ecology, University of Freiburg, | ||
15 | Freiburg, Germany\", \"affiliation_02\": \"\", \"affiliation_03\": | 15 | Freiburg, Germany\", \"affiliation_02\": \"\", \"affiliation_03\": | ||
16 | \"\", \"data_credit\": [\"software\", \"publication\"], \"email\": | 16 | \"\", \"data_credit\": [\"software\", \"publication\"], \"email\": | ||
17 | \"simone.fontana@mail.nature.uni-freiburg.de\", \"given_name\": | 17 | \"simone.fontana@mail.nature.uni-freiburg.de\", \"given_name\": | ||
18 | \"Simone\", \"identifier\": \"\", \"name\": \"Fontana\"}, | 18 | \"Simone\", \"identifier\": \"\", \"name\": \"Fontana\"}, | ||
19 | {\"affiliation\": \"WSL\", \"affiliation_02\": \"\", | 19 | {\"affiliation\": \"WSL\", \"affiliation_02\": \"\", | ||
20 | \"affiliation_03\": \"\", \"data_credit\": [\"collection\", | 20 | \"affiliation_03\": \"\", \"data_credit\": [\"collection\", | ||
21 | \"publication\"], \"email\": \"marco.moretti@wsl.ch\", \"given_name\": | 21 | \"publication\"], \"email\": \"marco.moretti@wsl.ch\", \"given_name\": | ||
22 | \"Marco\", \"identifier\": \"0000-0002-5845-3198\", \"name\": | 22 | \"Marco\", \"identifier\": \"0000-0002-5845-3198\", \"name\": | ||
23 | \"Moretti\"}]", | 23 | \"Moretti\"}]", | ||
24 | "author_email": null, | 24 | "author_email": null, | ||
25 | "creator_user_id": "209d9eae-601f-4860-b46d-32f16878fae0", | 25 | "creator_user_id": "209d9eae-601f-4860-b46d-32f16878fae0", | ||
26 | "date": "[{\"date\": \"2020-09-01\", \"date_type\": \"collected\", | 26 | "date": "[{\"date\": \"2020-09-01\", \"date_type\": \"collected\", | ||
27 | \"end_date\": \"2022-07-01\"}]", | 27 | \"end_date\": \"2022-07-01\"}]", | ||
28 | "doi": "10.16904/envidat.337", | 28 | "doi": "10.16904/envidat.337", | ||
29 | "funding": "[{\"grant_number\": \"16.0101.PJ/S284-0366\", | 29 | "funding": "[{\"grant_number\": \"16.0101.PJ/S284-0366\", | ||
30 | \"institution\": \"Swiss Federal Office for the Environment (FOEN)\", | 30 | \"institution\": \"Swiss Federal Office for the Environment (FOEN)\", | ||
31 | \"institution_url\": \"\"}, {\"grant_number\": \"31BD30_172467\", | 31 | \"institution_url\": \"\"}, {\"grant_number\": \"31BD30_172467\", | ||
32 | \"institution\": \"Swiss National Science Foundation\", | 32 | \"institution\": \"Swiss National Science Foundation\", | ||
33 | \"institution_url\": \"\"}, {\"grant_number\": \"2019-2917/1.1\", | 33 | \"institution_url\": \"\"}, {\"grant_number\": \"2019-2917/1.1\", | ||
34 | \"institution\": \"G\u00f6hner Stiftung\", \"institution_url\": \"\"}, | 34 | \"institution\": \"G\u00f6hner Stiftung\", \"institution_url\": \"\"}, | ||
35 | {\"grant_number\": \"FO 1420/1-1\", \"institution\": \"German Federal | 35 | {\"grant_number\": \"FO 1420/1-1\", \"institution\": \"German Federal | ||
36 | Ministry of Education and Research\", \"institution_url\": \"\"}]", | 36 | Ministry of Education and Research\", \"institution_url\": \"\"}]", | ||
37 | "groups": [], | 37 | "groups": [], | ||
38 | "id": "89138c9e-5bf6-4ef5-b8d2-d73f20b8b6de", | 38 | "id": "89138c9e-5bf6-4ef5-b8d2-d73f20b8b6de", | ||
39 | "isopen": true, | 39 | "isopen": true, | ||
40 | "language": "en", | 40 | "language": "en", | ||
41 | "license_id": "CC0-1.0", | 41 | "license_id": "CC0-1.0", | ||
42 | "license_title": "Creative Commons Zero - No Rights Reserved (CC0 | 42 | "license_title": "Creative Commons Zero - No Rights Reserved (CC0 | ||
43 | 1.0)", | 43 | 1.0)", | ||
44 | "license_url": "https://creativecommons.org/publicdomain/zero/1.0/", | 44 | "license_url": "https://creativecommons.org/publicdomain/zero/1.0/", | ||
45 | "maintainer": "{\"affiliation\": \"WSL\", \"email\": | 45 | "maintainer": "{\"affiliation\": \"WSL\", \"email\": | ||
46 | \"marco.moretti@wsl.ch\", \"given_name\": \"Marco\", \"identifier\": | 46 | \"marco.moretti@wsl.ch\", \"given_name\": \"Marco\", \"identifier\": | ||
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49 | "metadata_created": "2022-07-25T08:58:07.413511", | 49 | "metadata_created": "2022-07-25T08:58:07.413511", | ||
n | 50 | "metadata_modified": "2023-01-19T10:25:18.340306", | n | 50 | "metadata_modified": "2023-01-19T10:40:56.446001", |
51 | "name": | 51 | "name": | ||
52 | "data-on-wild-bee-taxonomic-and-functional-diversity-in-switzerland", | 52 | "data-on-wild-bee-taxonomic-and-functional-diversity-in-switzerland", | ||
53 | "notes": "Raw data supporting the paper \"Countrywide wild bee | 53 | "notes": "Raw data supporting the paper \"Countrywide wild bee | ||
54 | taxonomic and functional diversity reveal a spatial mismatch between | 54 | taxonomic and functional diversity reveal a spatial mismatch between | ||
55 | alpha and beta-diversity facets across multiple ecological | 55 | alpha and beta-diversity facets across multiple ecological | ||
56 | gradients\". It contains taxonomic and functional metrics in 3343 | 56 | gradients\". It contains taxonomic and functional metrics in 3343 | ||
57 | community-plots distributed across Switzerland. The calculated metrics | 57 | community-plots distributed across Switzerland. The calculated metrics | ||
58 | are:\r\n- Alpha taxonomic community metrics: species richness and | 58 | are:\r\n- Alpha taxonomic community metrics: species richness and | ||
59 | Shannon diversity\r\n- Alpha functional community metrics: Functional | 59 | Shannon diversity\r\n- Alpha functional community metrics: Functional | ||
60 | richness (using the Trait Onion Peeling index, TOP), functional | 60 | richness (using the Trait Onion Peeling index, TOP), functional | ||
61 | eveness (using the Trait Even Distribution index, TED) and the | 61 | eveness (using the Trait Even Distribution index, TED) and the | ||
62 | functional dispersion.\r\n- Community weighted means of 8 functional | 62 | functional dispersion.\r\n- Community weighted means of 8 functional | ||
63 | traits \r\n- The local community contributions on the functional and | 63 | traits \r\n- The local community contributions on the functional and | ||
64 | taxonomic beta diversity (LCBD).\r\n\r\nThe dataset also includes the | 64 | taxonomic beta diversity (LCBD).\r\n\r\nThe dataset also includes the | ||
65 | following:\r\n- The used predictors to model the spatial distribution | 65 | following:\r\n- The used predictors to model the spatial distribution | ||
66 | of the community metrics (climate PCA, vegetation PCA, land-use | 66 | of the community metrics (climate PCA, vegetation PCA, land-use | ||
67 | metrics, beekeeping intensity).\r\n-The three types of protected | 67 | metrics, beekeeping intensity).\r\n-The three types of protected | ||
68 | areas, defined according to the protective measures.\r\n- The model | 68 | areas, defined according to the protective measures.\r\n- The model | ||
69 | evaluation, variable importance and partial dependece data.\r\n\r\n", | 69 | evaluation, variable importance and partial dependece data.\r\n\r\n", | ||
70 | "num_resources": 6, | 70 | "num_resources": 6, | ||
71 | "num_tags": 14, | 71 | "num_tags": 14, | ||
72 | "organization": { | 72 | "organization": { | ||
73 | "approval_status": "approved", | 73 | "approval_status": "approved", | ||
74 | "created": "2018-05-18T09:12:30.577470", | 74 | "created": "2018-05-18T09:12:30.577470", | ||
75 | "description": "We study the relationship between threatened | 75 | "description": "We study the relationship between threatened | ||
76 | species and their habitat with the objective to develop evidence-based | 76 | species and their habitat with the objective to develop evidence-based | ||
77 | instruments for conservation. The viability of populations of habitat | 77 | instruments for conservation. The viability of populations of habitat | ||
78 | specialists is often limited due to restricted availability of | 78 | specialists is often limited due to restricted availability of | ||
79 | suitable habitat or discontinuous distribution. We focus on selected | 79 | suitable habitat or discontinuous distribution. We focus on selected | ||
80 | animal species of conservation concern (forest birds, bats, forest | 80 | animal species of conservation concern (forest birds, bats, forest | ||
81 | insects) and analyse species-habitat relationships at a scale ranging | 81 | insects) and analyse species-habitat relationships at a scale ranging | ||
82 | from single subpopulations to entire metapopulations. We strive | 82 | from single subpopulations to entire metapopulations. We strive | ||
83 | towards standardised recording of elusive species with novel | 83 | towards standardised recording of elusive species with novel | ||
84 | techniques, assessing environmental variables and combining these | 84 | techniques, assessing environmental variables and combining these | ||
85 | field data with data from remote sensing. We determine limiting | 85 | field data with data from remote sensing. We determine limiting | ||
86 | factors (habitat, climate, resources) and predict species occurrence | 86 | factors (habitat, climate, resources) and predict species occurrence | ||
87 | and habitat suitability with modelling techniques.\r\n\r\nThese models | 87 | and habitat suitability with modelling techniques.\r\n\r\nThese models | ||
88 | allow to predict species occurrence patterns and to delineate | 88 | allow to predict species occurrence patterns and to delineate | ||
89 | evidence-based priority areas for conservation. Our long-term | 89 | evidence-based priority areas for conservation. Our long-term | ||
90 | collaboration with federal and cantonal stakeholders of forest and | 90 | collaboration with federal and cantonal stakeholders of forest and | ||
91 | nature conservation enables the combination of research results with | 91 | nature conservation enables the combination of research results with | ||
92 | conservation requirements (e.g. species action plans, forest | 92 | conservation requirements (e.g. species action plans, forest | ||
93 | biodiversity expert panel, scientific counsel for bat protection). | 93 | biodiversity expert panel, scientific counsel for bat protection). | ||
94 | While we investigate complete distribution ranges in bats, we focus on | 94 | While we investigate complete distribution ranges in bats, we focus on | ||
95 | forest habitats in birds and insects given the large extent and high | 95 | forest habitats in birds and insects given the large extent and high | ||
96 | importance of forests for biodiversity conservation in Switzerland.", | 96 | importance of forests for biodiversity conservation in Switzerland.", | ||
97 | "id": "32672ec5-c180-471e-92f7-ef58e00eb1fb", | 97 | "id": "32672ec5-c180-471e-92f7-ef58e00eb1fb", | ||
98 | "image_url": "2018-07-10-090115.162284LogoWSL.svg", | 98 | "image_url": "2018-07-10-090115.162284LogoWSL.svg", | ||
99 | "is_organization": true, | 99 | "is_organization": true, | ||
100 | "name": "conservation-biology", | 100 | "name": "conservation-biology", | ||
101 | "state": "active", | 101 | "state": "active", | ||
102 | "title": "Conservation Biology", | 102 | "title": "Conservation Biology", | ||
103 | "type": "organization" | 103 | "type": "organization" | ||
104 | }, | 104 | }, | ||
105 | "owner_org": "32672ec5-c180-471e-92f7-ef58e00eb1fb", | 105 | "owner_org": "32672ec5-c180-471e-92f7-ef58e00eb1fb", | ||
106 | "private": false, | 106 | "private": false, | ||
107 | "publication": "{\"publication_year\": \"2022\", \"publisher\": | 107 | "publication": "{\"publication_year\": \"2022\", \"publisher\": | ||
108 | \"EnviDat\"}", | 108 | \"EnviDat\"}", | ||
109 | "publication_state": "published", | 109 | "publication_state": "published", | ||
110 | "related_datasets": "", | 110 | "related_datasets": "", | ||
111 | "related_publications": "", | 111 | "related_publications": "", | ||
112 | "relationships_as_object": [], | 112 | "relationships_as_object": [], | ||
113 | "relationships_as_subject": [], | 113 | "relationships_as_subject": [], | ||
114 | "resource_type": "dataset", | 114 | "resource_type": "dataset", | ||
115 | "resource_type_general": "dataset", | 115 | "resource_type_general": "dataset", | ||
116 | "resources": [ | 116 | "resources": [ | ||
117 | { | 117 | { | ||
118 | "cache_last_updated": null, | 118 | "cache_last_updated": null, | ||
119 | "cache_url": null, | 119 | "cache_url": null, | ||
120 | "created": "2022-07-25T09:03:38.650524", | 120 | "created": "2022-07-25T09:03:38.650524", | ||
121 | "description": "Response data used for the modeling.\r\nLat: | 121 | "description": "Response data used for the modeling.\r\nLat: | ||
122 | latitude community plot\r\nLon: longitude community plot\r\nRichness: | 122 | latitude community plot\r\nLon: longitude community plot\r\nRichness: | ||
123 | species richness\t\r\nShannon: Shannon diversity index\t\r\nFDis: | 123 | species richness\t\r\nShannon: Shannon diversity index\t\r\nFDis: | ||
124 | functional dispersion\t\r\nTOP: Trait Onion Peeling (functional | 124 | functional dispersion\t\r\nTOP: Trait Onion Peeling (functional | ||
125 | richness)\r\nTED: Trait Even Distribution (functional | 125 | richness)\r\nTED: Trait Even Distribution (functional | ||
126 | evenness)\r\nLCBD_taxo: local community contributions to taxonomic | 126 | evenness)\r\nLCBD_taxo: local community contributions to taxonomic | ||
127 | beta diversity\t\r\nLCBD_fun: local community contributions to | 127 | beta diversity\t\r\nLCBD_fun: local community contributions to | ||
128 | functional beta diversity\r\nITD: community weighted means | 128 | functional beta diversity\r\nITD: community weighted means | ||
129 | inter-tegula distance\r\nfeeding_specialization: community weighted | 129 | inter-tegula distance\r\nfeeding_specialization: community weighted | ||
130 | means feeding specialization\t\r\ntong_length: community weighted | 130 | means feeding specialization\t\r\ntong_length: community weighted | ||
131 | means tongue length\r\nphenostart: community weighted means start of | 131 | means tongue length\r\nphenostart: community weighted means start of | ||
132 | the phenology\r\nphenoduration: community weighted means duration of | 132 | the phenology\r\nphenoduration: community weighted means duration of | ||
133 | the phenoloy\r\ncleptoparasite: community weighted means | 133 | the phenoloy\r\ncleptoparasite: community weighted means | ||
134 | cleptoparasites\r\nbelowgound: community weighted means proportion | 134 | cleptoparasites\r\nbelowgound: community weighted means proportion | ||
135 | belowground\r\nsolitary: community weighted means proportion | 135 | belowground\r\nsolitary: community weighted means proportion | ||
136 | solitary", | 136 | solitary", | ||
137 | "doi": "", | 137 | "doi": "", | ||
138 | "format": ".txt", | 138 | "format": ".txt", | ||
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158 | c2f-33da-4b5e-a54a-990297987e74/download/diversity_data_complete.txt", | 158 | c2f-33da-4b5e-a54a-990297987e74/download/diversity_data_complete.txt", | ||
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164 | "created": "2022-11-16T14:21:42.832676", | 164 | "created": "2022-11-16T14:21:42.832676", | ||
165 | "description": "The compress file includes the rster files of | 165 | "description": "The compress file includes the rster files of | ||
166 | the predictors used in the analyses, including the climate, resource | 166 | the predictors used in the analyses, including the climate, resource | ||
167 | availability, land-use and beekeeping intensity metrics.\r\n\r\nThe | 167 | availability, land-use and beekeeping intensity metrics.\r\n\r\nThe | ||
168 | raster on the climate contains the PCA axes on the CHELSA | 168 | raster on the climate contains the PCA axes on the CHELSA | ||
169 | variables.\r\nThe raster on resource availability contains the PCA | 169 | variables.\r\nThe raster on resource availability contains the PCA | ||
170 | axes on plant communities\r\nThe raster on land-use contains the | 170 | axes on plant communities\r\nThe raster on land-use contains the | ||
171 | land-use composition at 2500 m.\r\nThe raster on beekeeping intensity | 171 | land-use composition at 2500 m.\r\nThe raster on beekeeping intensity | ||
172 | contains thedensity of hives within 2500 m", | 172 | contains thedensity of hives within 2500 m", | ||
173 | "doi": "", | 173 | "doi": "", | ||
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198 | "created": "2022-12-08T10:04:02.855462", | 198 | "created": "2022-12-08T10:04:02.855462", | ||
199 | "description": "Protected areas considered, divided in three | 199 | "description": "Protected areas considered, divided in three | ||
200 | groups and rasters: protected areas sensu stricto, protected areas | 200 | groups and rasters: protected areas sensu stricto, protected areas | ||
201 | sensu lato and all protected areas", | 201 | sensu lato and all protected areas", | ||
202 | "doi": "", | 202 | "doi": "", | ||
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229 | "description": "The compress file containes a set of txt files | 229 | "description": "The compress file containes a set of txt files | ||
230 | with the variable importance, the model evaluation metrics and the | 230 | with the variable importance, the model evaluation metrics and the | ||
231 | partial dependence plots of each of the responses used (alpha and beta | 231 | partial dependence plots of each of the responses used (alpha and beta | ||
232 | taxonomic and functional diversity metrics; community weighted means | 232 | taxonomic and functional diversity metrics; community weighted means | ||
233 | of 8 functional traits)", | 233 | of 8 functional traits)", | ||
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n | 262 | "description": "The .zip file contains:\r\n- **Environmental | n | 262 | "description": "The .zip file contains the rasters of the |
263 | predictors.** The environmental predictors used for the | 263 | environmental predictors and the predicted responses:\r\n- | ||
264 | modelling:\r\n\r\n - The raster on the climate contains the PCA | 264 | **Environmental predictors.**:\r\n\r\n - The raster on the | ||
265 | axes on the CHELSA variables.\r\n\r\n - The raster on resource | 265 | climate contains the PCA axes on the CHELSA variables.\r\n\r\n - | ||
266 | availability contains the PCA axes on plant communities\r\n\r\n - | 266 | The raster on resource availability contains the PCA axes on plant | ||
267 | The raster on land-use contains the land-use composition at 2500 | 267 | communities\r\n\r\n - The raster on land-use contains the | ||
268 | m.\r\n\r\n - The raster on beekeeping intensity contains | 268 | land-use composition at 2500 m.\r\n\r\n - The raster on | ||
269 | thedensity of hives within 2500 m\r\n\r\n- two raster stacks of the | 269 | beekeeping intensity contains thedensity of hives within 2500 | ||
270 | environmental predictors used: masking the water bodies and without | 270 | m\r\n\r\n- **Responses**: \r\n- The predicted responses without | ||
271 | masking them.\r\n", | 271 | masking the waterbodies | ||
272 | (Diversity_stack_revised_Selected_descriptors.tif).\r\n- The | ||||
273 | predicted responses masking the waterbodies | ||||
274 | (masked.stack.all.diversity.tiff).\r\n", | ||||
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299 | "description": "Zip file containing two rasters: the digital | 302 | "description": "Zip file containing two rasters: the digital | ||
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301 | "doi": "", | 304 | "doi": "", | ||
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327 | 45.81802],[5.95587, 45.81802]]]}", | 330 | 45.81802],[5.95587, 45.81802]]]}", | ||
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376 | "id": "72e50e64-9d5f-4526-ac99-5b55164c5cda", | 379 | "id": "72e50e64-9d5f-4526-ac99-5b55164c5cda", | ||
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431 | "title": "Data on wild bee taxonomic and functional diversity in | 434 | "title": "Data on wild bee taxonomic and functional diversity in | ||
432 | Switzerland", | 435 | Switzerland", | ||
433 | "type": "dataset", | 436 | "type": "dataset", | ||
434 | "url": null, | 437 | "url": null, | ||
435 | "version": "1.0" | 438 | "version": "1.0" | ||
436 | } | 439 | } |